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Ahmed, Jubed Omee (2014) Characterisation of the roles of Poz1 and Stn1 at Schizosaccharomyces pombe telomeres. Doctoral thesis (PhD), University of Sussex.

Alamri, Ohoud (2012) Ionising radiation-induced DNA damage response in marine mussels, Mytilus edulis. Doctoral thesis (DPhil), University of Sussex.

Alcantara, Diana (2013) Understanding at the molecular level the consequences of defective ATR signalling in humans. Doctoral thesis (PhD), University of Sussex.

B

Baeissa, Hanadi M and Pearl, Frances M G (2019) Identifying the impact of inframe insertions and deletions on protein function in cancer. Journal of Computational Biology. ISSN 1066-5277

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Blanc-Mathieu, Romain, Krasovec, Marc, Hebrard, Maxime, Yau, Sheree, Desgranges, Elodie, Martin, Joel, Schackwitz, Wendy, Kuo, Alan, Salin, Gerald, Donnadieu, Cecile, Desdevises, Yves, Sanchez-Ferandin, Sophie, Moreau, Hervé, Rivals, Eric, Grigoriev, Igor V, Grimsley, Nigel, Eyre-Walker, Adam and Piganeau, Gwenael (2017) Population genomics of picophytoplankton unveils novel chromosome hypervariability. Science Advances, 3 (7). e1700239. ISSN 2375-2548

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Brunton, Holly (2011) Investigating the role of higher order chromatin structure and DNA damage complexity on ATM signalling and G2/M checkpoint arrest. Doctoral thesis (DPhil), University of Sussex.

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C

Carballo, Jesús A and Cha, Rita S (2007) Meiotic roles of Mec1, a budding yeast homolog of mammalian ATR/ATM. Chromosome Research, 15 (5). pp. 539-550. ISSN 0967-3849

Carballo, Jesús A, Johnson, Anthony L, Sedgwick, Steven G and Cha, Rita S (2008) Phosphorylation of the axial element protein Hop1 by Mec1/Tel1 ensures meiotic interhomolog recombination. Cell, 132 (5). pp. 758-770. ISSN 0092-8674

Carballo, Jesús A, Panizza, Silvia, Serrentino, Maria Elisabetta, Johnson, Anthony L, Geymonat, Marco, Borde, Valérie, Klein, Franz and Cha, Rita S (2013) Budding yeast ATM/ATR control meiotic double-strand break (DSB) levels by down-regulating Rec114, an essential component of the DSB-machinery. PLoS Genetics, 9 (6). e1003545. ISSN 1553-7390

Carroll, Jean (2013) Investigating aprataxin function: roles in DNA single strand break repair and functional cellular effects. Doctoral thesis (PhD), University of Sussex.

Casadio, Angela, Longman, Dasa, Hug, Nele, Delavaine, Laurent, Vallejos Baier, Raul, Alonso, Claudio R and Caceres, Javier F (2015) Identification and characterization of novel factors that act in the nonsense-mediated mRNA decay pathway in nematodes, flies and mammals. EMBO reports, 16 (1). pp. 71-78. ISSN 1469-221X

Caser Tena, Teresa, Maerz, Lars, Szafranski, Karol, Groth, Marco, Blatte, Tamara, Donow, Cornelia, Matysik, Sabrina, Walther, Paul, Jeggo, Penelope A, Burkhalter, Martin and Philipp, Melanie (2019) Resting cells rely on the DNA helicase component MCM2 to build cilia. Nucleic Acids Research, 47 (1). pp. 134-151. ISSN 0305-1048

Castellano, David, Eyre-Walker, Adam and Munch, Kasper (2019) Impact of mutation rate and selection at linked sites on DNA variation across the genomes of humans and other homininae. Genome Biology and Evolution. ISSN 1759-6653

Castellano, David, James, Jennifer and Eyre-Walker, Adam (2018) Nearly neutral evolution across the Drosophila melanogaster genome. Molecular Biology and Evolution, 35 (11). pp. 2685-2694. ISSN 0737-4038

Chambers, Helen (2011) Investigating the effects of repair of DNA single-strand breaks on chromatin structure. Doctoral thesis (DPhil), University of Sussex.

Cloney, Ross (2011) Involvement of human DNA polymerase kappa in nucleotide excision repair. Doctoral thesis (DPhil), University of Sussex.

Cohen-Woods, Sarah, Craig, Ian, Gaysina, Darya and et al, (2010) The Bipolar Association case-control study (BACCS) and meta-analysis: no association with the 5,10-Methylenetetrahydrofolate reductase gene and bipolar disorder. American Journal of Medical Genetics Part B: Neuropsychiatric Genetics, 153B (7). pp. 1298-1304. ISSN 1552-4841

Connell, Claire M., Colnaghi, Rita and Wheatley, Sally P. (2008) Nuclear survivin has reduced stability and is not cytoprotective. Journal of Biological Chemistry, 238 (6). pp. 3289-3296. ISSN 0021-9258

Cooper, Simon J (2017) Investigating the role of FMRP, CYFIP1 and DDX3X in the processes of mRNA localisation and translation within mesenchymal cells. Doctoral thesis (PhD), University of Sussex.

Costa, Marta, Calleja, Manuel, Alonso, Claudio R and Simpson, Pat (2014) The bristle patterning genes hairy and extramacrochaetae regulate the development of structures required for flight in Diptera. Developmental Biology, 388 (2). pp. 205-215. ISSN 0012-1606

Coulon, Stéphane, Ramasubramanyan, Sharada, Alies, Carole, Philippin, Gaëlle, Lehmann, Alan and Fuchs, Robert P (2010) Rad8Rad5/Mms2–Ubc13 ubiquitin ligase complex controls translesion synthesis in fission yeast. EMBO Journal, 29 (12). pp. 2048-2058. ISSN 0261-4189

Covo, Shay, de Villartay, Jean-Pierre, Jeggo, Penny A and Livneh, Zvi (2009) Translesion DNA synthesis-assisted non-homologous end-joining of complex double-strand breaks prevents loss of DNA sequences in mammalian cells. Nucleic Acids Research, 37 (20). pp. 6737-6745. ISSN 0305-1048

D

Dziadkowiec, Dorota, Petters, Edyta, Dyjankiewicz, Agnieszka, Karpinski, Pawel, Garcia, Valerie, Watson, Adam T. and Carr, Antony M. (2009) The role of novel genes rrp1(+) and rrp2(+) in the repair of DNA damage in Schizosaccharomycespombe. DNA Repair, 8 (5). pp. 627-636. ISSN 1568-7864

E

Edelweiss Villava Robles, Casandra (2015) The molecular regulation of Hox gene RNA processing during Drosophila embryonic development. Doctoral thesis (PhD), University of Sussex.

Etheridge, Thomas James (2016) Application of photoactivated localisation microscopy to visualising eukaryotic DNA replication processes. Doctoral thesis (PhD), University of Sussex.

Eyre-Walker, Adam (2017) Mitochondrial replacement therapy: are mito-nuclear interactions likely to be a problem? Genetics, 205 (4). pp. 1365-1372. ISSN 0016-6731

G

Gaysina, Darya, Cohen-Woods, Sarah, Chow, Philip C, Martucci, Livia, Schosser, Alexandra, Ball, Harriet A, Tozzi, Federica, Perry, Julia, Muglia, Pierandrea, Kennedy, James L, King, Nicole, Vincent, John B, Parikh, Sagar V, Strauss, John, Craig, Ian W, McGuffin, Peter and Farmer, Anne (2010) Association analysis of DAOA and DAO in bipolar disorder: results from two independent case-control studies. Bipolar Disorders, 12 (5). pp. 579-581. ISSN 1398-5647

Gibson, Beth and Eyre-Walker, Adam (2019) Investigating evolutionary rate variation in bacteria. Journal of Molecular Evolution. ISSN 0022-2844

Gibson, Beth, Wilson, Daniel J, Feil, Edward and Eyre-Walker, Adam (2018) The distribution of bacterial doubling times in the wild. Proceedings of the Royal Society B: Biological Sciences, 285 (1880). 20180789 1-9. ISSN 0962-8452

Gilks, William (2016) Graphing and tabulating next-generation sequencing and genotyping data. [Dataset]

Gilks, William (2016) Read-mapping for next-generation sequencing data (Drosophila melanogaster). [Dataset]

Gilks, William (2016) Read-mapping for next-generation sequencing data (Wolbachia). [Dataset]

Gilks, William (2016) SNP and indel discovery and genotyping in next-generation sequencing data. [Dataset]

Gilks, William (2016) Structural variant discovery and genotyping in next-generation sequencing data. [Dataset]

Gilks, William P, Pennell, Tanya M, Flis, Ilona and Webster, Matthew T (2016) Genotype reproducibility testing in next-generation sequencing data. [Dataset]

Gilks, William P, Pennell, Tanya M, Flis, Ilona, Webster, Matthew T and Morrow, Edward H (2016) Whole genome resequencing of a laboratory-adapted Drosophila melanogaster population sample. F1000Research, 5. a2644. ISSN 2046-1402

Gittens, William H, Johnson, Dominic J, Allison, Rachal M, Cooper, Tim J, Thomas, Holly and Neale, Matthew J (2019) A nucleotide resolution map of Top2-linked DNA breaks in the yeast and human genome. Nature Communications, 10. a4846. ISSN 2041-1723

Goodarzi, Aaron A, Noon, Angela T and Jeggo, Penny A (2009) The impact of heterochromatin on DSB repair. Biochemical Society Transactions, 37 (3). pp. 569-576. ISSN 03005127

Grima, Dominic P, Sullivan, Melanie, Zabolotskaya, Maria V, Browne, Cathy, Seago, Julian, Wan, Kay Chong, Okada, Yoshio and Newbury, Sarah F (2008) The 5'-3' exoribonuclease pacman is required for epithelial sheet sealing in Drosophila and genetically interacts with the phosphatase puckered. Biology of the Cell, 100 (12). pp. 687-701. ISSN 0248-4900

Guilliam, Thomas A (2017) An investigation into the role, recruitment, and regulation of PrimPol in DNA replication restart. Doctoral thesis (PhD), University of Sussex.

H

Herbert, Alex D, Carr, Antony M and Hoffmann, Eva (2014) FindFoci: a focus detection algorithm with automated parameter training that closely matches human assignments, reduces human inconsistencies and increases speed of analysis. PLoS ONE, 9 (12). e114749. ISSN 1932-6203

Hirota, Kouji, Sonoda, Eiichiro, Kawamoto, Takuo, Motegi, Akira, Masutani, Chikahide, Hanaoka, Fumio, Szüts, Dávid, Iwai, Shigenori, Sale, Julian E, Lehmann, Alan and Takeda, Shunichi (2010) Simultaneous disruption of two DNA polymerases, Polη and Polζ, in Avian DT40 cells unmasks the role of Polη in cellular response to various DNA lesions. PLoS Genetics, 6 (10). ISSN 1553-7390

Hishida, T, Kubota, Y, Carr, Antony M and Iwasaki, H (2009) RAD6-RAD18-RAD5-pathway-dependent tolerance to chronic low-dose ultraviolet light. Nature, 457 (7229). pp. 612-615. ISSN 0028-0836

Hodgkinson, Alan James (2011) Patterns of mutation in the human genome. Doctoral thesis (DPhil), University of Sussex.

Hu, Bin, Liao, Chunyan, Millson, Stefan H, Mollapour, Mehdi, Prodromou, Chrisostomos, Pearl, Laurence H, Piper, Peter W and Panaretou, Barry (2005) Qri2/Nse4, a component of the essential Smc5/6 DNA repair complex. Molecular Microbiology, 55 (6). pp. 1735-1750. ISSN 0950-382X

J

James, J, Castellano, D and Eyre-Walker, A (2016) DNA sequence diversity and the efficiency of natural selection in animal mitochondrial DNA. Heredity, 2017 (118). pp. 88-95. ISSN 0018-067X

Jeggo, Peggy A. (2009) Risks from low dose/dose rate radiation: what an understanding of DNA damage response mechanisms can tell us. Health Physics, 97 (5). pp. 416-425. ISSN 0017-9078

Jeggo, Penny (2009) Mechanisms conferring sensitivity to low dose radiation exposure and consideration of potentially sensitivie individuals. In: Late health effects of ionizing radiation: bridging the experimental and epidemiological divide, 4-6 May 2009, Georgetown University, Washington D.C..

Jones, Christopher I, Pashler, Amy L, Towler, Benjamin P, Robinson, Sophie R and Newbury, Sarah F (2016) RNA-seq reveals post-transcriptional regulation of Drosophila insulin-like peptide dilp8 and the neuropeptide-like precursor Nplp2 by the exoribonuclease Pacman/XRN1. Nucleic Acids Research, 44 (1). pp. 267-280. ISSN 0305-1048

Jordan, Philip, Copsey, Alice, Newnham, Louise, Kolar, Elizabeth, Lichten, Michael and Hoffmann, Eva (2009) Ipl1/Aurora B kinase coordinates synaptonemal complex disassembly with cell cycle progression and crossover formation in budding yeast meiosis. Genes & Development, 23 (18). pp. 2237-2251. ISSN 0890-9369

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Kakarougkas, Andreas, Ismail, Amani, Chambers, Anna, Riballo, Queti, Herbert, Alex, Kunzel, Julia, Lobrich, Markus, Jeggo, Penny and Downs, Jessica (2014) Requirement for PBAF in transcriptional repression and repair at DNA breaks in actively transcribed regions of chromatin. Molecular Cell, 55 (5). pp. 723-732. ISSN 1097-2765

Kaschula, Richard, Pinho, Sofia and Alonso, Claudio R (2018) MicroRNA-dependent regulation of Hox gene expression sculpts fine-grain morphological patterns in a Drosophila appendage. Development, 145 (20). dev161133. ISSN 0950-1991

Keen, Benjamin A (2015) Molecular dissection of PrimPol, a novel primase-polymerase involved in damage tolerance during DNA replication in eukaryotic cells. Doctoral thesis (PhD), University of Sussex.

Keszthelyi, Andrea, Minchell, Nicola and Baxter, Jon (2016) The causes and consequences of topological stress during DNA replication. Genes, 7 (12). p. 134. ISSN 2073-4425

Khosravi, Mona (2012) ‘Investigating the regulation of growth by nitric oxide signalling in Drosophila melanogaster’. Doctoral thesis (DPhil), University of Sussex.

Kim, Leo Dhohoon (2016) Visualizing discourses and governance of human embryonic stem cell research in South Korea (in comparison to the UK). Doctoral thesis (PhD), University of Sussex.

Kirk, Jacob Daniel (2017) Understanding the roles of the Smc5/6 complex on meiotic recombination. Doctoral thesis (PhD), University of Sussex.

Kozik, Zuzanna (2019) Investigation of DNA double-strand break-associated histone post-translational modifications using targeted mass spectrometry. Doctoral thesis (PhD), University of Sussex.

Krasovec, Marc, Eyre-Walker, Adam, Grimsley, Nigel, Salmeron, Christophe, Pecqueur, David, Piganeau, Gwenael and Sanchez-Ferandin, Sophie (2016) Fitness effects of spontaneous mutations in picoeukaryotic marine green algae. G3, 6 (7). pp. 2063-2071. ISSN 2160-1836

Krasovec, Marc, Eyre-Walker, Adam, Sanchez-Ferandin, Sophie and Piganeau, Gwenael (2017) Spontaneous mutation rate in the smallest photosynthetic eukaryotes. Molecular Biology and Evolution, 34 (7). pp. 1770-1779. ISSN 0737-4038

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Laugel, V, Dalloz, C, Durand, M, Sauvanaud, F, Kristensen, U, Vincent, M C, Pasquier, L, Odent, S, Cormier-Daire, V, Gener, B, Tobias, E S, Tolmie, J L, Martin-Coignard, D, Drouin-Garraud, V, Heron, D, Journel, H, Raffo, E, Vigneron, J, Lyonnet, S, Murday, V, Gubser-Mercati, D, Funalot, B, Sanchez del Pozo, J, Muñoz, E, Gennery, A R, Salih, M, Noruzinia, M, Prescott, K, Ramos, L, Stark, Z, Fieggen, K, Chabrol, B, Sarda, P, Edery, P, Bloch-Zupan, A, Fawcett, H, Pham, D, Egly, J M, Lehmann, A R, Sarasin, A and Dollfus, H (2010) Mutation update for the CSB/ERCC6 and CSA/ERCC8 genes involved in Cockayne syndrome. Human Mutation, 31 (2). pp. 113-126. ISSN 1059-7794

Lee, Chieh-Ju (2014) Visualizing chromosomal rearrangements caused by replication fork stalling in a single cell. Doctoral thesis (PhD), University of Sussex.

Lehmann, Alan R. (2008) XPD structure reveals its secrets. DNA Repair, 7 (11). pp. 1912-1915. ISSN 1568-7864

Lin, Su-Jiun, Wardlaw, Christopher Paul, Morishita, Takashi, Miyabe, Izumi, Chahwan, Charly, Caspari, Thomas, Schmidt, Ulrike, Carr, Antony and Garcia, Valerie (2012) The Rad4TopBP1 ATR-Activation domain functions in G1/S phase in a chromatin-dependent manner. PLoS Genetics, 8 (6). ISSN 1553-7390

Long, Christopher (2017) The molecularisation of security: medical countermeasure development and the Biomedical Advanced Research and Development Authority (BARDA), 2006-2015. Doctoral thesis (PhD), University of Sussex.

Loomis, Rebecca J, Naoe, Yoshinori, Parker, J Brandon, Savic, Velibor, Bozovsky, Matthew R, Macfarlan, Todd, Manley, James L and Chakravarti, Debabrata (2009) Chromatin binding of SRp20 and ASF/SF2 and dissociation from mitotic chromosomes is modulated by histone H3 serine 10 phosphorylation. Molecular Cell, 33 (4). pp. 450-461. ISSN 1097-2765

Lukas, Claudia, Savic, Velibor, Bekker-Jensen, Simon, Doil, Carsten, Neumann, Beate, Pedersen, Ronni Sølvhøj, Grøfte, Merete, Chan, Kok Lung, Hickson, Ian David, Bartek, Jiri and Lukas, Jiri (2011) 53BP1 nuclear bodies form around DNA lesions generated by mitotic transmission of chromosomes under replication stress. Nature Cell Biology, 13 (3). pp. 243-253. ISSN 1465-7392

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Machin, Felix, Torres-Rosell, Jordi, De Piccoli, Giacomo, Carballo, Jesus, Cha, Rita, Jarmuz, Adam and Aragon, Luis (2006) Transcription of ribosomal genes can cause nondisjunction. The Journal of Cell Biology (JCB), 173 (6). pp. 893-903. ISSN 0021-9525

Mallo, Moisés and Alonso, Claudio R (2013) The regulation of Hox gene expression during animal development. Development, 140 (19). pp. 3951-3963. ISSN 0950-1991

Mari, Pierre-Olivier, Verbiest, Vincent, Sabbioneda, Simone, Gourdin, Audrey M, Wijgers, Nils, Dinant, Christoffel, Lehmann, Alan R, Vermeulen, Wim and Giglia-Mari, Guiseppina (2010) Influence of the live cell DNA marker DRAQ5 on chromatin-associated processes. DNA Repair, 9 (7). pp. 848-855. ISSN 1568-7864

McGonnell, Imelda M, Graham, Anthony, Richardson, Joanna, Fish, Jennifer L, Depew, Michael J, Dee, Chris T, Holland, Peter WH and Takahashi, Tokiharu (2011) Evolution of the Alx homeobox gene family: parallel retention and independent loss of the vertebrate Alx3 gene. Evolution and Development, 13 (4). pp. 343-351. ISSN 1520-541X

Millson, Stefan H, Truman, Andrew W, King, Victoria, Prodromou, Chrisostomos, Pearl, Laurence H and Piper, Peter W (2005) A two-hybrid screen of the yeast proteome for Hsp90 interactors uncovers a novel Hsp90 chaperone requirement in the activity of a stress-activated mitogen-activated protein kinase, Slt2p (Mpk1p). Eukaryotic Cell, 4 (5). pp. 849-860. ISSN 1535-9778

Millson, Stefan H, Truman, Andrew W, Wolfram, Francis, King, Victoria, Panaretou, Barry, Prodromou, Chrisostomos, Pearl, Laurence H and Piper, Peter W (2004) Investigating the protein-protein interactions of the yeast Hsp90 chaperone system by two-hybrid analysis: potential uses and limitations of this approach. Cell Stress and Chaperones, 9 (4). pp. 359-368. ISSN 1355-8145

Minchell, Nicola Elizabeth, Keszthelyi, Andrea and Baxter, Jonathan (2020) Cohesin causes replicative DNA damage by trapping DNA topological stress. Molecular cell, 78 (4). pp. 739-751. ISSN 1097-2765

Mohebi, Saed (2014) Analysis of chromosomal rearrangements after replication restart. Doctoral thesis (PhD), University of Sussex.

Morgan Jones, Molly (2011) Governing the constructs of life: what constitutes ‘good’ governance? Doctoral thesis (DPhil), University of Sussex.

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Newport, Melanie J, Abdelhaq, Sonia, Abulezz, Emal, Adeyemo, Adebowale, Davey, Gail, Gad, Yehia, Hennig, Branwen, Marshall, Patricia A, Mohamed, Amal M, Royal, Charmaine D, Soodyall, Himla and Rotimi, Charles N (2008) Genomics research in Africa: implications for disease diagnosis, treatment and drug development: proceedings of the 5th annual meeting of the African Society of Human Genetics. In: 5th Annual Meeting of the African Society of Human Genetics, 3- 5 November 2007, Cairo, Egypt.

Nijnik, Anastasia, Dawson, Sara, Woodbine, Lisa, Visetnoi, Supawan, Bennett, Sophia, Jones, Margaret, Turner, Gareth D, Jeggo, Penelope A, Goodnow, Christopher C and Cornall, Richard J (2009) Impaired lymphocyte development and antibody class switching and increased malignancy in a murine model of DNA ligase IV syndrome. Journal of Clinical Investigation, 119 (6). pp. 1696-1705. ISSN 00219738

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O'Garro-Priddie, Edward (2022) The role of microRNAs in Drosophila larval locomotion. Doctoral thesis (PhD), University of Sussex.

Overbury, Peter Charles (2020) Illuminating meaningful diversity in complex feature spaces through adaptive grid-based genetic algorithms. Doctoral thesis (PhD), University of Sussex.

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Panaretou, Barry, Prodromou, Chrisostomos, Roe, S Mark, O'Brien, Ronan, Ladbury, John E, Piper, Peter W and Pearl, Laurence H (1998) ATP binding and hydrolysis are essential to the function of the Hsp90 molecular chaperone in vivo. EMBO Journal, 17 (16). pp. 4829-4836. ISSN 0261-4189

Panaretou, Barry, Siligardi, Giuliana, Meyer, Philippe, Maloney, Alison, Sullivan, Janis K, Singh, Shradha, Millson, Stefan H, Clarke, Paul A, Naaby-Hansen, Soren, Stein, Rob, Cramer, Rainer, Mollapour, Mehdi, Workman, Paul, Piper, Peter W, Pearl, Laurence H and Prodromou, Chrisostomos (2002) Activation of the ATPase activity of hsp90 by the stress-regulated cochaperone aha1. Molecular Cell, 10 (6). pp. 1307-1318. ISSN 1097-2765

Panaretou, Barry, Sinclair, Kirsty, Prodromou, Chrisostomos, Johal, Jasvinder, Pearl, Laurence and Piper, Peter W (1999) The Hsp90 of Candida albicans can confer Hsp90 functions in Saccharomyces cerevisiae: a potential model for the processes that generate immunogenic fragments of this molecular chaperone in C. albicans infections. Microbiology, 145 (12). pp. 3455-3463. ISSN 1350-0872

Patraquim, Pedro, Mumtaz, Muhammad Ali Shahzad, Pueyo, Jose Ignacio, Aspden, Julie Louise and Couso, Juan-Pablo (2020) Developmental regulation of canonical and small ORF translation from mRNAs. Genome Biology, 21. a128 1-26. ISSN 1474-760X

Patraquim, Pedro Miguel Queirós do Patrocínio (2016) Molecular and developmental impact of RNA processing on mammalian Hox genes. Doctoral thesis (PhD), University of Sussex.

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