Article

Johnson, Chris, Philippides, Andrew and Husbands, Philip (2019) Simulating soft-bodied swimmers with particle-based physics. Soft Robotics, 6 (2). pp. 263-275. ISSN 2169-5180

Baron, Nicholas, Philippides, Andy and Rojas, Nicolas (2018) A novel kinematically redundant planar parallel robot manipulator with full rotatability. Journal of Mechanisms and Robotics, 11 (1). 011008 1-8. ISSN 1942-4302

Templeton, Anne, Drury, John and Philippides, Andy (2018) Walking together: behavioural signatures of psychological crowds. Royal Society Open Science, 5 (7). 180172 1-14. ISSN 2054-5703

Dewar, Alexander D M, Wystrach, Antoine, Philippides, Andy and Graham, Paul (2017) Neural coding in the visual system of Drosophila melanogaster: how do small neural populations support visually guided behaviours? PLoS Computational Biology, 13 (10). ISSN 1553-7358

Graham, Paul and Philippides, Andy (2017) Vision for navigation: what can we learn from ants? Arthropod Structure & Development, 46 (5). pp. 718-722. ISSN 1467-8039

Ewing, Donna L, Manassei, Miranda, Gould van Praag, Cassandra, Philippides, Andrew O, Critchley, Hugo D and Garfinkel, Sarah N (2017) Sleep and the heart: interoceptive differences linked to poor experiential sleep quality in anxiety and depression. Biological Psychology, 127. pp. 163-172. ISSN 0301-0511

Gould van Praag, Cassandra D, Garfinkel, Sarah N, Sparasci, Oliver, Mees, Alex, Philippides, Andy O, Ware, Mark, Ottaviani, Chrsitina and Critchley, Hugo D (2017) Mind-wandering and alterations to default mode network connectivity when listening to naturalistic versus artificial sounds. Scientific Reports, 7. a45273. ISSN 2045-2322

Seitz, Michael J, Templeton, Anne, Drury, John, Köster, Gerta and Philippides, Andrew (2016) Parsimony versus reductionism: how can crowd psychology be introduced into computer simulation? Review of General Psychology, 21 (1). pp. 95-102. ISSN 1089-2680

von Sivers, I, Templeton, A, Künzner, F, Köster, G, Drury, J, Philippides, A, Neckel, T and Bungartz, H-J (2016) Modelling social identification and helping in evacuation simulation. Safety Science, 89. pp. 288-300. ISSN 0925-7535

Shim, Yoonsik, Philippides, Andy, Staras, Kevin and Husbands, Phil (2016) Unsupervised learning in an ensemble of spiking neural networks mediated by ITDP. PLoS Computational Biology, 12 (10). e1005137. ISSN 1553-734X

Johnson, Chris, Philippides, Andrew and Husbands, Philip (2016) Active shape discrimination with compliant bodies as reservoir computers. Artificial Life, 22 (2). pp. 241-268. ISSN 1064-5462

Li, Xiujuan, Padhan, Narendra, Sjöström, Elisabet O, Roche, Francis P, Testini, Chiara, Honkura, Naoki, Sáinz-Jaspeado, Miguel, Gordon, Emma, Bentley, Katie, Philippides, Andrew, Tolmachev, Vladimir, Dejana, Elisabetta, Stan, Radu V, Vestweber, Dietmar, Ballmer-Hofer, Kurt, Betsholtz, Christer, Pietras, Kristian, Jansson, Leif and Claesson-Welsh, Lena (2016) VEGFR2 pY949 signalling regulates adherens junction integrity and metastatic spread. Nature Communications, 7 (1). a11017. ISSN 2041-1723

Collett, T S, Philippides, A and Hempel De Ibarra, N (2016) Insect navigation: How do wasps get home? Current Biology, 26 (4). R166-R168. ISSN 0960-9822

Wystrach, Antoine, Dewar, Alexander David McDonald, Philippides, Andrew and Graham, Paul (2016) How do field of view and resolution affect the information content of panoramic scenes for visual navigation? A computational investigation. Journal of Comparative Physiology A, 202 (2). pp. 87-95. ISSN 0340-7594

Fernandes, A Sofia D, Philippides, Andrew, Collett, Tom S and Niven, Jeremy E (2015) Acquisition and expression of memories of distance and direction in navigating wood ants. Journal of Experimental Biology, 218 (22). pp. 3580-3588. ISSN 0022-0949

Dewar, Alex D M, Wystrach, Antoine, Graham, Paul and Philippides, Andrew (2015) Navigation-specific neural coding in the visual system of Drosophila. BioSystems, 136. pp. 120-127. ISSN 0303-2647

Templeton, Anne, Drury, John and Philippides, Andrew (2015) From mindless masses to small groups: Conceptualizing collective behavior in crowd modeling. Review of General Psychology, 19 (3). pp. 215-229. ISSN 1089-2680

Gaffin, Douglas D, Dewar, Alexander, Graham, Paul and Philippides, Andrew (2015) Insect-inspired navigation algorithm for an aerial agent using satellite imagery. PLoS ONE, 10 (4). e0122077. ISSN 1932-6203

Brunger, Louise, Smith, Adam, Re, Roberta, Wickham, Martin, Philippides, Andy, Watten, Phil and Yeomans, Martin (2015) Validation of an iPad visual analogue rating system for assessing appetite and satiety. Appetite, 84. pp. 259-263. ISSN 0195-6663

Phng, Li-Kun, Gebala, Véronique, Bentley, Katie, Philippides, Andrew, Wacker, Andrin, Mathivet, Thomas, Sauteur, Loïc, Stanchi, Fabio, Belting, Heinz-Georg, Affolter, Markus and Gerhardt, Holger (2015) Formin-mediated actin polymerization at endothelial junctions is required for vessel lumen formation and stabilization. Developmental Cell, 32 (1). pp. 123-132. ISSN 1534-5807

Riabinina, Olena, Hempel De Ibarra, Natalie, Philippides, Andrew and Collett, Thomas S (2014) Head movements and the optic flow generated during the learning flights of bumblebees. Journal of Experimental Biology, 217 (15). pp. 2633-2642. ISSN 0022-0949

De Caux, Robert, Smith, Christopher, Kniveton, Dominic, Black, Richard and Philippides, Andrew (2014) Dynamic, small-world social network generation through local agent interactions. Complexity, 19 (6). pp. 44-53. ISSN 1076-2787

Wystrach, Antoine, Philippides, Andrew, Aurejac, Amandine, Cheng, Ken and Graham, Paul (2014) Visual scanning behaviours and their role in the navigation of the Australian desert ant Melophorus bagoti. Journal of Comparative Physiology A, 200 (7). pp. 615-626. ISSN 0340-7594

Dewar, Alexander D M, Philippides, Andrew and Graham, Paul (2014) What is the relationship between visual environment and the form of ant learning-walks? An in silico investigation of insect navigation. Adaptive Behavior, 22 (3). pp. 163-179. ISSN 1059-7123

Bentley, Katie, Franco, Claudio Areias, Philippides, Andrew, Blanco, Raquel, Dierkes, Martina, Gebala, Véronique, Stanchi, Fabio, Jones, Martin, Aspalter, Irene M, Cagna, Guiseppe, Weström, Simone, Claesson-Welsh, Lena, Vestweber, Dietmar and Gerhardt, Holger (2014) The role of differential VE-cadherin dynamics in cell rearrangement during angiogenesis. Nature Cell Biology, 16 (4). pp. 309-321. ISSN 1465-7392

von Sivers, Isabella, Templeton, Anne, Köster, Gerta, Drury, John and Philippides, Andrew (2014) Humans do not always act selfishly: social identity and helping in emergency evacuation simulation. Transportation Research Procedia, 2. pp. 585-593. ISSN 2352-1465

Philippides, Andrew, Graham, Paul, Baddeley, Bart and Husbands, Philip (2014) Using neural networks to understand the information that guides behavior: a case study in visual navigation. Artificial Neural Networks, 1260. pp. 227-244. ISSN 1064-3745

Wystrach, Antoine, Philippides, Andrew, Aurejac, Amandine, Cheng, Ken and Graham, Paul (2014) Visual scanning behaviours and their role in the navigation of the Australian desert ant Melophorus bagoti. Journal of Comparative Physiology A, 200 (7). pp. 615-626. ISSN 0340-7594

Baddeley, Bart, Graham, Paul, Husbands, Philip and Philippides, Andrew (2012) A model of ant route navigation driven by scene familiarity. PLoS Computational Biology, 8 (1). e1002336. ISSN 1553-734X

Baddeley, Bart, Graham, Paul, Philippides, Andrew and Husbands, Philip (2011) Holistic Visual Encoding of Ant-Like Routes: Navigation without Waypoints. Adaptive Behavior, 19 (1). pp. 3-15. ISSN 1059-7123

Philippides, Andrew, Baddeley, Bart, Cheng, Ken and Graham, Paul (2011) How might ants use panoramic views for route navigation? Journal of Experimental Biology, 214 (3). pp. 445-451. ISSN 0022-0949

Husbands, Philip, Philippides, Andrew, Vargas, Patricia, Buckley, Christopher L., Fine, Peter, Di Paolo, Ezequiel and O'Shea, Michael (2010) Spatial, Temporal, and Modulatory Factors Affecting GasNet Evolvability in a Visually Guided Robotics Task. Complexity, 16 (2). pp. 35-44. ISSN 1076-2787

Bush, Daniel, Philippides, Andrew, Husbands, Phil and O'Shea, Michael (2010) Spike-timing dependent plasticity and the cognitive map. Frontiers in Computational Neuroscience, 4. p. 142. ISSN 1662-5188

Graham, Paul, Philippides, Andy and Baddeley, Bart (2010) Animal Cognition: Multi-modal Interactions in Ant Learning. Current Biology, 20 (15). R639-R640. ISSN 0960-9822

Bush, Daniel, Philippides, Andrew, Husbands, Phil and O'Shea, Michael (2010) Reconciling the STDP and BCM Models of Synaptic Plasticity in a Spiking Recurrent Neural Network. Neural Computation, 22 (8). pp. 2059-2085. ISSN 0899-7667

Bush, Daniel, Philippides, Andrew, Husbands, Phil and O'Shea, Michael (2010) Dual coding with STDP in a spiking recurrent neural network model of the hippocampus. PLoS Computational Biology, 6 (7). e1000839. ISSN 1553-7358

Hempel de Ibarra, Natalie, Philippides, Andrew, Riabinina, Olena and Collett, Thomas S (2009) Preferred viewing directions of bumblebees (Bombus terrestris L.) when learning and approaching their nest site. Journal of Experimental Biology, 212 (20). pp. 3193-3204. ISSN 0022-0949

Baddeley, Bartholomew, Philippides, Andrew, Graham, Paul, Hempel De Ibarra, Natalie, Collett, Thomas and Husbands, Phillip (2009) What can be learnt from analysing insect orientation flights using probabilistic SLAM? Biological Cybernetics, 101 (3). pp. 169-182. ISSN 0340-1200

Riabinina, Olena and Philippides, Andrew O. (2009) A model of visual detection of angular speed for bees. Journal of Theoretical Biology, 257 (1). pp. 61-72. ISSN 0022-5193

Ott, Swidbert R., Philippides, Andrew, Elphick, Maurice R. and O'Shea, Michael (2007) Enhanced fidelity of diffusive nitric oxide signalling by the spatial segregation of source and target neurones in the memory centre of an insect brain. European Journal of Neuroscience, 25 (1). pp. 181-190. ISSN 0953-816X

Smith, Lincoln, Philippides, Andrew, Graham, Paul, Baddeley, Bart and Husbands, Philip (2007) Linked local navigation for visual route guidance. Adaptive Behavior, 15 (3). pp. 257-271. ISSN 1059-7123

Philippides, Andrew, Ott, Swidbert R., Husbands, Philip, Lovick, Thelma A. and O'Shea, Michael (2005) Modeling co-operative volume signaling in a plexus of nitric oxide synthase-expressing neurons. Journal of Neuroscience, 25 (28). pp. 6520-6532. ISSN 0270-6474

Philippides, Andy, Husbands, Phil, Smith, Tom and O'Shea, Michael (2005) Flexible couplings: diffusing neuromodulators and adaptive robotics. Artificial Life, 11 (1-2). pp. 139-160. ISSN 1064-5462

Smith, Tony, Husbands, Phil, Philippides, Andy and O'Shea, Michael (2002) Neuronal Plasticity and Temporal Adaptivity: GasNet Robot Control Networks. Adaptive Behavior, 10 (3-4). pp. 161-183. ISSN 1059-7123

Husbands, Phil, Philippides, Andy, Smith, Tom and O'Shea, Michael (2001) Volume Signalling in Real and Robot Nervous Systems. Theory in Biosciences, 120 (3-4). pp. 253-269. ISSN 1431-7613

Philippides, Andy, Husbands, Phil and O'Shea, Michael (2000) Four-Dimensional Neuronal Signaling by Nitric Oxide: A Computational Analysis. Journal of Neuroscience, 20 (3). pp. 1199-1207. ISSN 0270-6474

Book Section

O’Shea, Michael, Husbands, Phil and Philippides, Andy (2015) Nitric oxide neuromodulation. In: Jaeger, Dieter and Jung, Ranu (eds.) Encyclopedia of Computational Neuroscience. Springer New York, pp. 2087-2100. ISBN 9781461466758

Johnson, Chris, Philippides, Andrew and Husbands, Philip (2014) Active shape discrimination with physical reservoir computers. In: Sayama, Hiroki, Rieffel, John, Risi, Sebastian, Doursat, René and Lipson, Hod (eds.) Artificial Life 14: Proceedings of the Fourteenth International Conference on the Synthesis and Simulation of Living Systems. MIT Press, Cambridge, MA, USA, pp. 178-185.

Husbands, Phil, Moioli, Renan, Shim, Yoonsik, Philippides, Andy, Vargas, Patricia and O'Shea, Michael (2014) Evolutionary robotics and neuroscience. In: The Horizons of Evolutionary Robotics. Intelligent Robotics and Autonomous Agents . MIT Press, Cambridge, MA, USA, pp. 17-63. ISBN 9780262026765

Husbands, Phil, Philippides, Andy and Seth, Anil K (2011) Artificial Neural Systems for Robots. In: Alonso, Eduardo and Mondragon, Esther (eds.) Computational Neuroscience for Advancing Artificial Intelligence: Models, Methods and Applications. IGI Global, pp. 214-248. ISBN 978-1609600211

Baddeley, Bart, Graham, Paul, Philippides, Andrew and Husbands, Philip (2011) Models of visually guided routes in ants: embodiment simplifies route acquisition. In: Intelligent robotics and applications: 4th international conference, ICIRA 2011, Aachen, Germany, December 6-8, 2011, proceedings. Lecture notes in computer science, 2 (7102). Springer Verlag, Heidelberg, pp. 75-84. ISBN 9783642254888

Philippides, Andrew, Husbands, Phil, Smith, Tom and O'Shea, Michael (2003) Structure-Based Models of NO Diffusion in the Nervous System. In: Feng, Jianfeng (ed.) Computational Neuroscience: A Comprehensive Approach. Chapman and Hall/CRC Press, pp. 91-125. ISBN 9781584883623

Conference or Workshop Item

Baddeley, Bart, Graham, Paul, Husbands, Philip and Philippides, Andrew (2011) Models of visually guided routes in ants: embodiment simplifies route acquisition. In: Proc. ICIRA 2011 Special session: A Body for the Brain:Embodied Intelligence in Bio-inspired Robotics.

Corcoran, Thomas Gregory, Philippides, Andy and Nowotny, Thomas (2011) Coarse-grained statistics for attributing criticality to heterogeneous neural networks. In: CNS 2011, 23-28 July 2011, Stockholm, Sweden.

Baddeley, Bart, Graham, Paul, Philippides, Andrew and Husbands, Philip (2010) Route Learning Through Classification. In: Proceedings of the International Symposium on AI-Inspired Biology, University of Birmingham.

Bush, Daniel, Philippides, Andy, Husbands, Phil and O'Shea, Michael (2008) Theta Phase Coding and Acetylcholine Modulation in a Spiking Neural Network. In: 10th international conference on Simulation of Adaptive Behavior: From Animals to Animats.

Bush, Daniel, Philippides, Andy, Husbands, Phil and O'Shea, Michael (2008) STDP and Attractor Network Models of Associative Learning. In: Connectionist models of behaviour and cognition II :Proceedings of the 11th Neural Computation and Psychology Workshop, University of Oxford, UK.

Smith, Lincoln, Philippides, Andrew, Graham, Paul and Husbands, Phil (2008) Linked Local Visual Navigation and Robustness to Motor Noise and Route Displacement. In: 10th international conference on Simulation of Adaptive Behavior: From Animals to Animats.

Bermudez, Edgar J, Philippides, Andrew and Seth, Anil K (2008) Movement strategies for learning in visual recognition. In: Eleventh International Conference on the Simulation and Synthesis of Living Systems.

Bush, Daniel, Philippides, Andrew, Husbands, Phil and O'Shea, Michael (2006) Investigating STDP and LTP in a spiking neural network. In: Proceedings Animals to Animats IX.

Smith, Lincoln, Philippides, Andrew and Husbands, Phil (2006) Navigation in Large-scale Environments Using an Augmented Model of Visual Homing. In: Proceedings Animals to Animats IX.

Bush, Daniel, Philippides, Andrew, Husbands, Phil and O'Shea, Michael (2006) Embodied learning: investigating stable Hebbian learning in spiking neural networks. In: Proceedings AISB Associative Learning and Reinforcement Learning Workshop,, Bristol.

Philippides, Andy, Husbands, Phil, Smith, Tom and O'Shea, Michael (2003) Fast and Loose: Biologically Inspired Couplings. In: Eighth International Conference on Artificial Life, Sydney, NSW, Australia.

Smith, Tom, Husbands, Phil, Philippides, Andy and O'Shea, Michael (2003) Temporally adaptive networks: Analysis of GasNet robot control. In: Eighth International Conference on Artificial Life, Sydney, NSW, Australia.

Smith, T, Philippides, A, Husbands, P and O'Shea, M (2002) Neutrality and ruggedness in robot landscapes. In: Proceedings IEEE International Congress on Evolutionary Computing 2002, Honolulu, Hawaii.

Smith, Tom, Husbands, Phil, Philippides, Andy and O'Shea, Michael (2002) Evaluating the Effectiveness of Biologically-Inspired Robot Control Networks through Operational Analysis. In: EPSRC/BBSRC International Workshop on Biologically-inspired robotics: The legacy of Grey Walter, HP Bristol Labs, UK.

Husbands, Phil, Philippides, Andy, Smith, Tom and O'Shea, Michael (2001) The Shifting Network: Volume Signalling in Real and Robot Nervous Systems. In: 6th European Conference on Advances in Artificial Life, Prague, Czech Republic.

Conference Proceedings

Akinci, Kaan and Philippides, Andrew (2019) Evolving recurrent neural network controllers by incremental fitness shaping. ALIFE 2019, Newcastle upon Tyne, UK, 29 July - 2nd August, 2019. Published in: Bacardit, Jaume, Fellermann, Harold, Goñi-Moreno, Angel and Füchslin, Rudolf Marcel, (eds.) Proceedings of the ALIFE Conference 2019 (ALIFE 2019): A Hybrid of the European Conference on Artificial Life (ECAL) and the International Conference on the Synthesis and Simulation of Living Systems (ALIFE). 416-423. The MIT Press

Knight, James C, Sakhapov, Daniil, Domcsek, Norbert, Dewar, Alexander D M, Graham, Paul, Nowotny, Thomas and Philippides, Andrew (2019) Insect-inspired visual navigation on-board an autonomous robot: real-world routes encoded in a single layer network. ALife 2019: the 2019 conference on Artificial Life, Newcastle, July 29 - August 2, 2019. Published in: Proceedings of ALIFE 2019: The 2019 Conference on Artificial Life. (31) 60-67. MIT Press ISBN 9780262358446

Baron, Nicholas, Philippides, Andy and Rojas, Nicolas (2018) A geometric method of singularity avoidance for kinematically redundant planar parallel robots. Advances in Robot Kinematics 2018, Bologna, Italy, 1 July- 5 July 2018. Published in: Lenarcic, Jadran and Parenti-Castelli, Vincenzo, (eds.) Advances in Robot Kinematics 2018. 187-194. Springer ISBN 9783319931883

Walker, Christopher, Graham, Paul and Philippides, Andrew (2017) Using deep autoencoders to investigate image matching in visual navigation. Conference on Biomimetic and Biohybrid Systems. Published in: Biomimetic and Biohybrid Systems. Living Machines 2017. 10384 465-474. Springer, Cham ISSN 0302-9743 ISBN 9783319635378

Philippides, Andy, Steadman, Nathan, Dewar, Alex, Walker, Christopher and Graham, Paul (2016) Insect-inspired visual navigation for flying robots. Conference on Biomimetic and Biohybrid Systems. Published in: Biomimetic and Biohybrid Systems. Living Machines 2016.. 9793 263-274. Springer International Publishing ISSN 0302-9743 ISBN 9783319424170

Calcraft, Paul Richard Thomas, Bell, Adrian T, Husbands, Phil, Philippides, Andrew and Niven, Jeremy E (2016) The evolution of handedness: why are ant colonies left- and right-handed? Published in: Biomath Communications: Proceedings BIOMATH’16.. 3 (1) ISSN 2367-5233

Roberts, Terri, Staras, Kevin, Husbands, Philip and Philippides, Andrew (2015) Entraining and copying of temporal correlations in dissociated cultured neurons. Published in: Biomimetic and Biohybrid Systems. Living Machines 2015. 9222 223-226. Springer, Cham ISSN 0302-9743 ISBN 9783319229782

Johnson, Chris, Philippides, Andrew and Husbands, Philip (2015) Maze navigation and memory with physical reservoir computers. European Conference on Artificial Life 2015, York, UK, 20-24 July 2015. Published in: Andrews, Paul, Caves, Leo, Doursat, René, Hickinbotham, Simon, Polack, Fiona, Stepney, Susan, Taylor, Tim and Timmis, Joe, (eds.) Late Breaking Proceedings of the European Conference on Artificial Life 2015. 19-22. MIT Press

Philippides, Andrew, Dewar, Alexander, Wystrach, Antoine, Mangan, Michael and Graham, Paul (2013) How active vision facilitates familiarity-based homing. Published in: Lepora, Nathan F, Mura, Anna, Krapp, Holger G, Verschure, Paul F M J, Prescott, Tony J and Unset, (eds.) Proceedings of the Second International Conference on Living Machines 2013: Biomimetic and Biohybrid Systems; London, UK; 29 July – 2 August 2013. 8064 427-430. Springer Verlag, Heidelberg. ISSN 1611-3349 ISBN 9783642398018