Read-mapping for next-generation sequencing data (Wolbachia)

Gilks, William (2016) Read-mapping for next-generation sequencing data (Wolbachia). [Dataset]

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Abstract

Code, log files and QC data. NCBI SRA accession number SRP091004. Note that sequencing Wolbachia was not a central aim of the project, and was undertaken in order to maximise the amount of information that could be extracted from the raw genome sequence data targetted at the fruit-fly host.

The pre-print manuscript for this data is available on biorxiv: "Whole genome resequencing of a laboratory-adapted Drosophila melanogaster population sample" http://biorxiv.org/content/early/2016/10/17/081554 doi: http://dx.doi.org/10.1101/081554

Item Type: Dataset
Additional Information: DOI:10.5281/zenodo.159784
Keywords: Genetics, Linux, genomics, next-generation sequencing, Drosophila, Wolbachia
Schools and Departments: School of Life Sciences > Evolution, Behaviour and Environment
Subjects: Q Science > QH Natural history > QH0301 Biology > QH0426 Genetics
Q Science > QH Natural history > QH0301 Biology > QH0426 Genetics > QH0438.4 Special aspects of the subject as a whole, A-Z
Q Science > QH Natural history > QH0301 Biology > QH0426 Genetics > QH0447 Genes. Alleles. Genome
Q Science > QH Natural history > QH0301 Biology > QH0426 Genetics > QH0470.A-Z Experimental organisms, A-Z
Q Science > QH Natural history > QH0301 Biology > QH0426 Genetics > QH0470.A-Z Experimental organisms, A-Z > QH0470.D7 Drosophila
Q Science > QH Natural history > QH0301 Biology > QH0426 Genetics > QH0460 Mutations
Q Science > QR Microbiology > QR0075 Bacteria
Related URLs:
Depositing User: William Gilks
Date Deposited: 15 Nov 2016 13:16
Last Modified: 15 Nov 2016 13:16
URI: http://sro.sussex.ac.uk/id/eprint/65477
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Project NameSussex Project NumberFunderFunder Ref
2Sexes_1Genome: Sex-specific genetic effects on fitness and human diseaseG0781EUROPEAN UNION2011-STG280632