Read-mapping for next-generation sequencing data (Drosophila melanogaster)

Gilks, William (2016) Read-mapping for next-generation sequencing data (Drosophila melanogaster). [Dataset]

Full text not available from this repository.

Abstract

Code, logs and quality-control data for whole-genome resequencing of Sussex-LHM and RG Drosophila melanogaster.

Mapping code is in the archive lhm_mapping_scripts.zip

Mapping logs are in the in the archive lhm_mapping_logs.zip

Other zip archives contain the quality control data.

The pre-print manuscript for this data is available on biorxiv: "Whole genome resequencing of a laboratory-adapted Drosophila melanogaster population sample" http://biorxiv.org/content/early/2016/10/17/081554 doi: http://dx.doi.org/10.1101/081554

Item Type: Dataset
Additional Information: DOI:10.5281/zenodo.159251
Keywords: Genetics, R, ggplot, genomics, next-generation sequencing, Drosophila.
Schools and Departments: School of Life Sciences > Evolution, Behaviour and Environment
Subjects: Q Science > QH Natural history > QH0301 Biology > QH0426 Genetics
Q Science > QH Natural history > QH0301 Biology > QH0426 Genetics > QH0438.4 Special aspects of the subject as a whole, A-Z
Q Science > QH Natural history > QH0301 Biology > QH0426 Genetics > QH0447 Genes. Alleles. Genome
Q Science > QH Natural history > QH0301 Biology > QH0426 Genetics > QH0470.A-Z Experimental organisms, A-Z
Q Science > QH Natural history > QH0301 Biology > QH0426 Genetics > QH0470.A-Z Experimental organisms, A-Z > QH0470.D7 Drosophila
Q Science > QH Natural history > QH0301 Biology > QH0426 Genetics > QH0460 Mutations
Related URLs:
Depositing User: William Gilks
Date Deposited: 15 Nov 2016 13:14
Last Modified: 15 Nov 2016 13:14
URI: http://sro.sussex.ac.uk/id/eprint/65476
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Project NameSussex Project NumberFunderFunder Ref
2Sexes_1Genome: Sex-specific genetic effects on fitness and human diseaseG0781EUROPEAN UNION2011-STG280632